Ongoing
- Computational Science Research Programme, LASTU (2010–2015)
- Health and Welfare of Children and Young People (2010–2013)
- Photonics and Modern Imaging Techniques (2010–2013)
- Nanoscience, FinNano (2006–2010)
- Sustainable Production and Products, KETJU (2006–2010)
- Nutrition, Food and Health, ELVIRA (2006–2010)
- Power in Finland, VALTA (2007–2010)
- Substance Use and Addictions, ADDIKTIO (2007–2010)
- The Future of Work and Well-being, WORK (2008–2011)
- Sustainable Energy, SusEn (2008–2011)
- Ubiquitous Computing and Diversity of Communication, MOTIVE (2009–2012)
- Responding to Public Health Challenges, SALVE (2009–2012)
The Academy of Finland is also participating in the joint European Baltic Sea Research Programme (2010–2016).